Sergii Domanskyi, Ph.D.

Assistant Computational Scientist

Development of novel computational, statistical and mathematical approaches for the analysis of Next Generation Sequencing (NGS) data.

I have a strong background in the physical and computational sciences, large-scale computational techniques, and software design, allowing me to model biological systems in multidisciplinary projects. In my post-doctoral research at Michigan State University, I have developed novel statistical and mathematical approaches in open-source packages PyIOmica, DigitalCellSorter, and DECNEO for time-series data analysis and discovery of the combinations of receptors from an extensive collection of single-cell RNA sequencing datasets. Currently, I am developing advanced computational approaches for quality control and downstream analysis of spatially resolved transcriptomics data. I am interested in algorithms exploring tumor growth, development dynamics, and gene expression regulation. I enjoy researching complex processes in the tumor microenvironment to help understand cancer biology questions through the analysis of Next Generation Sequencing data. I help automate and standardize data analysis workflows by creating Nextflow-based computational pipelines using state-of-the-art computational biology methods. My objective is to continue biostatistics analysis, develop bioinformatics algorithms and encapsulate these novel methods in reliable software for personal and HPC systems..

            Download CV            

 Visit Personal Lab Site    

Sergii Domanskyi on ORCID

Education and experience

Education

Clarkson University, Potsdam, NY
Ph.D., Physics
Adv: Prof. Vladimir Privman
2012-2018

National Technical University of Ukraine, Kyiv, Ukraine
Master of Science, Physics
Adv: Prof. Vyacheslav Gorshkov
2010-2012

National Technical University of Ukraine, Kyiv, Ukraine
Bachelor of Science, Physics
2006-2010

Experience:

Assistant Computational Scientist
The Jackson Laboratory, Bar Harbor, ME
2021-present

Post-Doctoral Research Associate
Michigan State University, East Lansing, MI
2018-2021

Visiting Graduate Student Researcher
Los Alamos National Laboratory, Los Alamos, NM
2015, 2016

Research and Teaching Assistant
Clarkson University, Potsdam, NY
2012-2018

Software Designer
Consulting and Information Technology, LLC, Kyiv, Ukraine
2011-2012