Neil Kindlon, M.S.

Programmer Analyst III

Custom bioinformatics software, data science, storage, and archiving in C++, python and bash.

  • Efficient and exhaustive search for conserved short motifs in genomic datasets, using C++
  • Automated metadata generation for archiving from inconsistent/incomplete record keeping, in python scripts
  • Custom tools to identify disk space usage by file types and comnpression formats, in C++ and bash.
  • Recreated bedtools, a fast, flexible, linux command line toolset for genomic arithmetic, written in C++ 60x faster than previous versions in key benchmarking cases
  • Structural variation detection and classification using long read technology

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