The Jackson Laboratory

Friedreich’s Ataxia Models & Efficacy Studies

Friedreich's ataxia (FA) is a hereditary neuromuscular disease affecting mainly the nervous system and the heart, with a population incidence of one in 50,000 worldwide. It presents with muscle weakness and ataxia (loss of balance and coordination). Most FA patients have a repeat expansion in the FXN gene, resulting in a deficiency of the mitochondrial protein frataxin.

JAX offers a suite of highly-validated FA-relevant cell and mouse models for neuroscience research and drug discovery, paired with expertise in developing comprehensive preclinical solutions tailored to your FA study goals. When you partner with JAX, we bring Ph.D.-level study directors to every project - delivering comprehensive project design, execution, and robust data delivery. Our study capabilities are broad, including readouts for behavioral data, advanced physiology, neuromuscular & electrophysiology, biomarker analysis, and more.

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The Jackson Laboratory - Friedreich's Ataxia Models & Efficacy Studies

JAX Friedreich's Ataxia Models

Gold Standard Human iPSCs and Mouse Models

In addition to FA mouse models, The Jackson Laboratory also offers human induced pluripotent stem cell (hiPSC) lines carrying neuromuscular disease-relevant variants, providing complementary tools for translational research.

See all FA Mouse Models at JAX

Common Strain Name

Friedreich's Ataxia Relevance 
PhenotypeDisease LatencyDetails

Fxnnull::YG8s(GAA)>800**
(030395)
Increased GAA Repeat Model

  • The mutation is a GAA repeat expansion; severity of disease correlates to the size of the expansion
  • The GAA repeat expansion results in reduced levels of frataxin
2 months
  • >800 GAA trinucleotides
  • Locomotor abnormalities in older mice
  • Protein levels (via ELISA) are reduced in cerebellum & heart compared to models with lower repeat expansions and controls
  • Decreased SDH activity compared to lower repeat expansions

Fxnflox/null::PV-Cre**
(029721)
Neuronal Specific Model

  • Cardiac-specific frataxin depletion
3 months
  • Neurological decline (based on our Neuroscore Guide) occurs ~8-9 weeks of age
  • Progressive decline in motor movement (rotarod & gait analysis) ~12 weeks of age
  • Increases in sporadic and uncontrolled movement, demonstrated via OpenField

Fxnflox/null::MCK-Cre
(029720)
Cardiac Specific Model

  • Neuronal-specific frataxin depletion
3 months
  • Peak body weight around 60 days; median survival is ~77 days
  • Cardiomyopathy: reduced ejection fractioning, fractional shortening, increased LV mass
  • Decreased SDH activity (in the heart) compared to wildtype

Fxnnull::YG8s(GAA)~300*
(030930)

  • Decreased levels of frataxin
  • Severity of disease correlates to the size of the expansion
2 months
  • Generationally unstable repeats

*Cryopreserved Strain
** For-profit institutions require a license

Friedreich's Ataxia Preclinical Studies with JAX

JAX brings deep preclinical expertise to Friedreich's Ataxia (FA) research, supporting both prophylactic and therapeutic study designs across the full arc of drug development.

We offer flexible study design that can be tailored as prophylactic or therapeutic interventions, with dosing routes and schedules customized to match the pharmacokinetics and mechanism of action of your therapeutic candidate.

In-Life Assessments

  • Cardiomyopathy evaluation
  • Rotarod and open-field behavioral testing
  • Nerve conduction velocity (NCV)

Post-mortem Study Readouts

  • Succinate dehydrogenase (SDH) activity, available as both qualitative and quantitative assays
  • Protein analysis and gene expression profiling
  • Vector biodistribution analysis (for AAV-based gene therapies)
  • Histology, including cardiac and skeletal muscle fibrosis

Consult About Your Ataxia Study Today

Sample Preclinical FA Efficacy Study

Study variables are different depending on your model of choice and research needs. Below is a sample study option.

Timeline8-13 weeks - depending on model
GroupsTypical n per group: N=12, mixed sex
In Vivo Readouts
  • Once
    • IV Dosing
  • Weekly (or 2x weekly)
    • Body weight
    • Neuroscore
    • Clinical Observation
  • 3 Time Points
    • Rotarod
    • Open field
  • Other
    • Blood collection (once pre-dose)
    • Nerve conduction velocity
Daily DosingOptions: IP/PO/SC/IV
Post-mortem
  • Tissue Collection (including DRGs)
  • Cardiac Puncture (Serum/plasma)
  • Data Summary
  • Shipment of Samples and Slides
Extra Histology/
Assays/Gene Expression
  • IHC
  • H&E and Histoenzymatic (Heart)
  • MSD Muscle Injury Panel
  • Postmortem gene expression

Post-mortem study tissue analysis is available.

Examples of Efficacy Study Data

Cardiac-Specific Model: Fxnflox/null::MCK-Cre 029720 - (A) SDH Colorimetric Assay. Mitochondria are isolated and quantified via SDH Colorimetric assay; Fxnflox/null::MCK-Cre mutants show decreased SDH activity compared to wildtype that worsens over time.
Cardiac-Specific Model: Fxnflox/null::MCK-Cre 029720 - (B & C) SDH Histoenzymatic Assay. Cardiac tissue is sectioned and stained with Nitro blue tetrazolium chloride (NBT) to qualitatively assess cell viability as a function of redox potential.
Cardiac-Specific Model: Fxnflox/null::MCK-Cre 029720 - (C1) Transverse heart section of Fxnflox/null::MCK-Cre mutant at 10 weeks.
Cardiac-Specific Model: Fxnflox/null::MCK-Cre 029720 - (C2) Transverse heart section of wildtype.

Cardiac-Specific Model: Fxnflox/null::MCK-Cre 029720

(A) SDH Colorimetric Assay. Mitochondria are isolated and quantified via SDH Colorimetric assay; Fxnflox/null::MCK-Cre mutants show decreased SDH activity compared to wildtype that worsens over time (B & C) SDH Histoenzymatic Assay. Cardiac tissue is sectioned and stained with Nitro blue tetrazolium chloride (NBT) to qualitatively assess cell viability as a function of redox potential. C1: transverse heart section of Fxnflox/null::MCK-Cre mutant at 10 weeks. C2: transverse heart section of wildtype.

Human GAA Repeat Expansion Model: Fxnnull::YG8s(GAA)>800 030395 - Human Frataxin Protein Expression: Frataxin protein levels measured by ELISA in cerebellum tissue lysates are significantly lower in 800 GAA repeat line compared to the models with 250 GAA and 600 GAA repeats.
Human GAA Repeat Expansion Model: Fxnnull::YG8s(GAA)>800 030395 - Human Frataxin Protein Expression: Frataxin protein levels measured by ELISA in heart tissue lysates are significantly lower in 800 GAA repeat line compared to the models with 250 GAA and 600 GAA repeats.

Human GAA Repeat Expansion Model: Fxnnull::YG8s(GAA)>800 030395

Human Frataxin Protein Expression: Frataxin protein levels measured by ELISA in cerebellum and heart tissue lysates are significantly lower in 800 GAA repeat line compared to the models with 250 GAA and 600 GAA repeats.

Neuronal-Specific Model: Fxnflox/null::PV-Cre 029721 - Open Field: Progressive ataxia is observed in Fxnflox/null::PV-Cre mutants at ~9-10 weeks, reflected in increased movement compared to wild type mice in the open field assay.
Neuronal-Specific Model: Fxnflox/null::PV-Cre 029721 - Open Field: Progressive ataxia is observed in Fxnflox/null::PV-Cre mutants at ~9-10 weeks, reflected in increased movement compared to wild type mice in the open field assay. Total Distance by time measured at 12 weeks of age.

Neuronal-Specific Model: Fxnflox/null::PV-Cre 029721

Open Field: Progressive ataxia is observed in Fxnflox/null::PV-Cre mutants at ~9-10 weeks, reflected in increased movement compared to wild type mice in the open field assay. Total Distance by time measured at 12 weeks of age.

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Preclinical Neurobiology Services

Access our guide to learn how JAX Preclinical Services can support your neurobiology research. It covers available mouse models, routes of administration, behavioral and physiological assay menus, and example study designs, alongside supporting resources such as biospecimens, hiPSCs, and custom model generation.

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