Ai94(TITL-GCaMP6s)-D;Rosa26-ZtTA (or Ai94D;Rosa26-ZtTA) mice have a Cre/Tet-dependent, fluorescent calcium indicator GCaMP6s inserted into the Igs7 locus (TIGRE; an intergenic region on mouse chromosome 9 that allows reporter expression to be tightly regulated), as well as a Cre-dependent tetracycline-controlled transactivator protein (tTA) inserted into the Gt(ROSA)26Sor locus on chromosome 6. After removal of the floxed-STOP cassette by Cre recombinase, resulting mice have doxycycline-inducible/reversible expression of GCaMP6 slow variant calcium indicator (GCaMP6s; an ultrasensitive detector of single neuronal action potentials with slower decay and response kinetics). Following subsequent calcium binding (such as neuronal activation), increased EGFP fluorescence is observed in those cells.
Hongkui Zeng, Allen Institute for Brain Science
Genetic Background | Generation |
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Allele Type | Gene Symbol | Gene Name |
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Targeted (Reporter, Transactivator) | Gt(ROSA)26Sor | gene trap ROSA 26, Philippe Soriano |
Allele Type | Gene Symbol | Gene Name |
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Targeted (Conditional ready (e.g. floxed), Reporter, Inducible) | Igs7 | intergenic site 7 |
Ai94(TITL-GCaMP6s)-D;Rosa26-ZtTA (or Ai94D;R26-ZtTA) mice have a Cre/Tet-dependent, fluorescent calcium indicator GCaMP6s (an ultrasensitive detector of single neuronal action potentials with slower decay and response kinetics) inserted into the Igs7 locus (TIGRE; an intergenic region on mouse chromosome 9 that allows reporter expression to be tightly regulated), as well as a Cre-dependent tetracycline-controlled transactivator protein (tTA) inserted into the Gt(ROSA)26Sor locus on chromosome 6.
In the absence of Cre recombinase, Ai94D;R26-ZtTA mice are designed to have widespread lacZ expression but the expression of both GCaMP6s (EGFP fluorescence) and tTA are blocked by a floxed STOP cassette in each allele.
Following exposure of Ai94D;R26-ZtTA mice to Cre recombinase, the floxed-STOP cassette in each allele is deleted; leading to expression of tTA and GCaMP6s in the cre-expressing cells (see additional details below). GCaMP6s expression can then be regulated with tetracycline or its analog doxycycline (dox).
When Ai94D;R26-ZtTA mice are bred with Cre-driver lines to create triple transgenic animals (GCaMP6s+/tTA+/Cre+), EGFP fluorescence in cre-expressing cells is low in the absence of calcium binding. Following calcium binding (such as neuronal activation), increased EGFP fluorescence is observed in those cells. See further phenotype considerations below.
Ai94D;R26-ZtTA mice heterozygous for both targeted mutations are expected to be viable and fertile with no reported gross physical or behavioral abnormalities. The Ai94D donating investigator reports that mice homozygous for Ai94D are viable and fertile with no reported gross physical or behavioral abnormalities. The R26-ZtTA donating investigator reports that mice heterozygous for R26-ZtTA are more healthy and fertile than mice homozygous for R26-ZtTA.
For characterization information of Ai94 with other tTA and Cre lines, see images at the Allen Institute for Brain Science website (Ai94(TITL-GCaMP6s) images).
Further phenotype considerations: Steinmetz et al. 2017 ENeuro reports aberrant neural activity is occasionally observed in Emx1-Cre;Camk2a-tTA;Ai94 mice. This paper is summarized below.
Steinmetz et al. 2017 ENeuro reports aberrant neural activity resembling interictal spikes were observed in some genotypes of GCaMP6f-expressing Ai93 mice. This activity was most prominent in Emx1-Cre;Camk2a-tTA;Ai93 mice and Emx1-Cre;Rosa26-ZtTA;Ai93 mice, and also in Camk2a-tTA;Ai93 mice that had undergone germline Cre recombination. Aberrant neural activity was also occasionally observed in Slc17a7-IRES-Cre;Camk2a-tTA;Ai93 mice and GCaMP6s-expressing Emx1-Cre;Camk2a-tTA;Ai94 mice. Several other combinations were absent of aberrant neural activity - including Emx1-CreERT2;Camk2a-tTA;Ai93 maintained on doxycycline, Camk2a-tTA;Ai93 with other Cre-drivers (Rorb-IRES2-Cre or Scnn1a-Tg3-Cre), Camk2-tTA with another GCaMP6s transgene (Camk2a-tTA;TRE-GCaMP6s line G6s2), Emx1-driven GCaMP6f (Emx1-Cre;Ai95) or GCaMP6s (Emx1-Cre;Ai96), excitatory neuron-expressing GCaMP6s strains (Snap25-2A-GCaMP6s and Thy1-GCaMP6s line GP4.3) and Pvalb-driven channelrhodopsin2 (Pvalb-Cre;Ai32).
Note on GCaMP6s: The GCaMP6 slow variant calcium indicator (GCaMP6s) is an ultrasensitive detector of single neuronal action potentials with slower decay and response kinetics (Chen et al. 2013 Nature 499:295), and is an improved version of GCaMP5G. The GCaMP6s fusion gene was designed by Drs. Douglas Kim and Loren Looger (Janelia Farm, HHMI). Compared to GCaMP6s, the slower kinetics render GCaMP6s more sensitive and slower to decay. GCaMP6s has a chicken smooth muscle M13 fragment of myosin light chain kinase, a circularly permutated EGFP (with several amino acid substitutions designed to optimize dynamic range, baseline fluorescence and sensitivity), and a rat calmodulin sequence modified to increase the fluorescence change for small calcium transients. Other modifications in the cpEGFP-to-CaM linker also improve sensor function. In the absence of calcium binding, dim EGFP fluorescence is expected as there is a pore from the outside of its barrel into the chromophore. Upon calcium binding, this pore becomes occupied and fluorescence is increased.
The Ai94(TITL-GCaMP6s)-D;Rosa26-ZtTA (or Ai94D;Rosa26-ZtTA) double mutant animals were created in 2015 by breeding mice harboring the R26-ZtTA allele (see Stock No. 012266) with B6J.Ai94D mice (Stock No. 024104). The R26-ZtTA allele and Ai94D allele are described below.
The Rosa26-ZtTA targeted mutation (R26-ZtTA; Gt(ROSA)26Sortm5(ACTB-tTA)Luo) was designed by Dr. Liqun Luo (Stanford University, HHMI) to have a CMV enhancer/chicken beta-actin core promoter (pCA), a loxP-flanked β-geo (lacZ/neo) transcriptional STOP cassette, the tetracycline-controlled transactivator protein (tTA) open reading frame, and an SV40 T-antigen poly(A) signal all inserted into Gt(ROSA)26Sor locus on chromosome 6. Mice harboring the ROSA26-ZtTA allele (on a mixed CD1, 129, C57BL/6 and/or FVB genetic background; see Stock No. 012266) were used for creating the Ai94D;R26-ZtTA double mutant animals.
The Ai94(TITL-GCaMP6s)-D allele (Ai94D; Igs7tm94.1(tetO-GCaMP6s)Hze) was created by Dr. Hongkui Zeng (Allen Institute for Brain Science) and has TRE::floxed-STOP::GCaMP6s inserted into the T1 TIGRE locus (an intergenic region on chromosome 9 [between AB124611 and Carm1] determined to have low basal transcriptional activity and allow high Cre and/or Tet inducibility). Therefore, the Ai94D allele is structurally composed of TIGRE-frt3-Ins-TRE-LSL-GCaMP6s-WPRE-bGHpA-Ins-AttL. The specific details of Ai94D are described for Stock No. 024104. B6J.Ai94D mice from Stock No. 024104 were used for creating the Ai94D;R26-ZtTA double mutant animals.
The GCaMP6 slow variant calcium indicator (GCaMP6s) is an ultrasensitive detector of single neuronal action potentials with slow response kinetics (Chen et al. 2013 Nature 499:295), and is an improved version of GCaMP5G. The GCaMP6s fusion gene was designed by Drs. Douglas Kim and Loren Looger (Janelia Farm, HHMI). GCaMP6s has a chicken smooth muscle M13 fragment of myosin light chain kinase, a circularly permutated EGFP (cpEGFP; aa 149-238 followed by aa 1-144 [with M153K, V163A, S175G, D180Y, T203V, A206K and V93I mutations to increase dynamic range/baseline fluorescence, as well as K166H mutation for increased sensitivity/slower kinetics]), and a rat calmodulin DNA fragment (CaM; aa 2-148 with N60D, D78Y, T79R, S81T and R90G mutations [also called N362D, D380Y, T381R, S383T and R392G, respectively] to increase the fluorescence change for small calcium transients. The T302L and R303P amino acid substitutions in the cpEGFP-to-CaM linker improve sensor function.
The TRE promoter used here is Tet-responsive Ptight; containing a modified Tet response element (TREmod) composed of seven direct 36 bp repeats (each containing the 19 bp tet operator sequence [tetO]). TREmod is just upstream of a minimal human cytomegalovirus promoter (PminCMVΔ), which lacks the enhancer that is part of the complete CMV promoter. Consequently, Ptight is silent in the absence of TetR or rTetR binding to tetO.
Expressed Gene | tTA, tetracycline-controlled transactivator, E. coli |
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Site of Expression | mice carrying this allele may be useful to generate compound mutant mice in which expression of a tetracycline-responsive promoter element (TRE; also called tet-operator or tetO)-driven gene of interest can be both directed to the cell types defined by the chosen Cre recombinase expression, as well as turned off by the addition of tetracycline (or its analog doxycycline [dox]). |
Expressed Gene | GCaMP, Genetically encoded calcium indicator, |
Site of Expression | Expression of fast variant calcium indicator (GCaMP6s) is under the control of tetO in cells/tissues where promoters driving Cre recombinase are expressed. |
Allele Name | targeted mutation 5, Liqun Luo |
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Allele Type | Targeted (Reporter, Transactivator) |
Allele Synonym(s) | ROSA26-ZtTA; ZtTA |
Gene Symbol and Name | Gt(ROSA)26Sor, gene trap ROSA 26, Philippe Soriano |
Gene Synonym(s) | |
Promoter | ACTB, actin, beta, chicken |
Expressed Gene | tTA, tetracycline-controlled transactivator, E. coli |
Site of Expression | mice carrying this allele may be useful to generate compound mutant mice in which expression of a tetracycline-responsive promoter element (TRE; also called tet-operator or tetO)-driven gene of interest can be both directed to the cell types defined by the chosen Cre recombinase expression, as well as turned off by the addition of tetracycline (or its analog doxycycline [dox]). |
Strain of Origin | (129X1/SvJ x 129S1/Sv)F1-Kitl+ |
Chromosome | 6 |
Molecular Note | The pCA-ZtTA construct was designed with a CMV enhancer/chicken beta-actin core promoter (pCA), a loxP-flanked beta-geo (lacZ-neomycin phosphotransferase fusion) transcriptional STOP cassette, the tetracycline-controlled transactivator protein (tTA or "Tet-Off") open reading frame, and an SV40 T-antigen poly(A) signal. This pCA-ZtTA construct was subcloned into the pROSA26-PA targeting vector to generate the final targeting construct pROSA26-ZtTA. |
Mutations Made By | Liqun Luo, Stanford University |
Allele Name | targeted mutation 94.1, Hongkui Zeng |
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Allele Type | Targeted (Conditional ready (e.g. floxed), Reporter, Inducible) |
Allele Synonym(s) | Ai94(TIGRE-Ins-TRE-LSL-GCaMP6s)-D; Ai94(TITL-GCaMP6s); Ai94D |
Gene Symbol and Name | Igs7, intergenic site 7 |
Gene Synonym(s) | |
Promoter | tetO, tet operator, |
Expressed Gene | GCaMP, Genetically encoded calcium indicator, |
Site of Expression | Expression of fast variant calcium indicator (GCaMP6s) is under the control of tetO in cells/tissues where promoters driving Cre recombinase are expressed. |
Strain of Origin | (129S6/SvEvTac x C57BL/6NCrl)F1 |
Chromosome | 9 |
Molecular Note | The replacement vector was designed with (from 5' to 3') an FRT3 site, two copies of chicken beta-globin HS4 insulator element (to reduce reporter gene expression in absence of transactivators), a modified Tet response element (TRE or tetO), a floxed-STOP cassette (stop codons in all three reading frames linked to synthetic pA-hGHpA-PGKpA), the GCaMP6 slow variant calcium indicator coding sequence, a WPRE sequence (to enhance mRNA stability), a BGH polyA, two copies of chicken beta-globin HS4 insulator element, an AttB site, a PGK-5'hygro cassette, an RNA splice donor and a FRT5 site. The GCaMP6 slow variant calcium indicator (GCaMP6s) is an ultrasensitive detector of single neuronal action potentials with slow response kinetics and is an improved version of GCaMP5G. Embryonic stem cells previously targeted with FRT3::AttB::PGK-neoR-polyA::FRT5::splice acceptor::3'hygro cassette::SV40 polyA:AttP in TIGRE, were re-transfected with the pTRE-LSL-GCaMP6s replacement vector and Flp recombinase vector for recombinase-mediated cassette exchange (RCME).Chimeric mice were bred with PhiC31 Gt(ROSA)26Sortm3(phiC31*)Sor mice to remove the AttB/AttP-flanked PGK-hygromycin-SV40polyA cassette and replace it with the recombined AttB/AttP site (AttL). |
When maintaining a live colony, mice heterozygous for both the Ai94D targeted mutation (Igs7tm94.1(tetO-GCaMP6s)Hze) and also for the R26-ZtTA targeted mutation (Gt(ROSA)26Sortm5(ACTB-tTA)Luo) may be bred to wildtype mice from the colony or to C57BL/6J inbred mice. Alternatively, mice heterozygous or homozygous for Ai94D and heterozygous for R26-ZtTA may be bred to wildtype mice from the colony or to C57BL/6J inbred mice.
The Ai94D donating investigator reports that mice homozygous for Ai94D are viable and fertile with no reported gross physical or behavioral abnormalities. The R26-ZtTA donating investigator reports that mice heterozygous for R26-ZtTA are more healthy and fertile than mice homozygous for R26-ZtTA.
When using the Ai94(TITL-GCaMP6s)-D;ROSA26-ZtTA mouse strain in a publication, please cite the originating article(s) and include JAX stock #024112 in your Materials and Methods section.
Facility Barrier Level Descriptions
Service/Product | Description | Price |
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Heterozygous for Gt(ROSA)26Sor<tm5(ACTB-tTA)Luo> and Igs7<tm94.1(tetO-GCaMP6s)Hze> or Heterozygous for Gt(ROSA)26Sor<tm5(ACTB-tTA)Luo> and wildtype for Igs7<tm94.1(tetO-GCaMP6s)Hze> or Wildtype for Gt(ROSA)26Sor<tm5(ACTB-tTA)Luo> and Heterozygous for Igs7<tm94.1(tetO-GCaMP6s)Hze> or Wildtype for Gt(ROSA)26Sor<tm5(ACTB-tTA)Luo> and Igs7<tm94.1(tetO-GCaMP6s)Hze> |
Frozen Mouse Embryo | STOCK Gt(ROSA)26Sor<tm5(ACTB-tTA)Luo> Igs7<tm94.1(tetO-GCaMP | $2595.00 |
Frozen Mouse Embryo | STOCK Gt(ROSA)26Sor<tm5(ACTB-tTA)Luo> Igs7<tm94.1(tetO-GCaMP | $2595.00 |
Frozen Mouse Embryo | STOCK Gt(ROSA)26Sor<tm5(ACTB-tTA)Luo> Igs7<tm94.1(tetO-GCaMP | $3373.50 |
Frozen Mouse Embryo | STOCK Gt(ROSA)26Sor<tm5(ACTB-tTA)Luo> Igs7<tm94.1(tetO-GCaMP | $3373.50 |
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