LOCUS Exported 6896 bp DNA linear UNA 14-JUN-2022 DEFINITION heterogeneous nuclear ribonucleoprotein A1 [Source:HGNC Symbol;Acc:HGNC:5031]. ACCESSION . VERSION . KEYWORDS . SOURCE Homo sapiens ORGANISM Homo sapiens REFERENCE 1 (bases 1 to 6896) AUTHORS Ensembl TITLE Direct Submission JOURNAL Exported Jun 14, 2022 from SnapGene 5.3.2 https://www.snapgene.com COMMENT gene ENSG00000135486 FEATURES Location/Qualifiers source 1..6896 /organism="Homo sapiens" /mol_type="genomic DNA" gene 1..6896 /label=HNRNPA1 /note="gene ENSG00000135486 Protein coding" /note="color: #a6acb3; direction: RIGHT" prim_transcript 1..6895 /label=HNRNPA1-203 /note="primary transcript ENST00000546500" /note="color: #a6acb3; direction: RIGHT" prim_transcript 471..5651 /label=HNRNPA1-238 /note="primary transcript ENST00000677385" /note="color: #a6acb3; direction: RIGHT" prim_transcript 471..5650 /label=HNRNPA1-231 /note="primary transcript ENST00000677210" /note="color: #a6acb3; direction: RIGHT" prim_transcript 471..5037 /label=HNRNPA1-237 /note="primary transcript ENST00000677375" /note="color: #a6acb3; direction: RIGHT" prim_transcript 499..5553 /label=HNRNPA1-234 /note="primary transcript ENST00000677249" /note="color: #a6acb3; direction: RIGHT" prim_transcript 506..5046 /label=HNRNPA1-220 /note="primary transcript ENST00000676725 Retained intron" /note="color: #a6acb3; direction: RIGHT" prim_transcript 506..5045 /label=HNRNPA1-259 /note="primary transcript ENST00000678418 Retained intron" /note="color: #a6acb3; direction: RIGHT" prim_transcript 512..5650 /label=HNRNPA1-209 /note="primary transcript ENST00000550482" /note="color: #a6acb3; direction: RIGHT" prim_transcript 534..6895 /label=HNRNPA1-202 /note="primary transcript ENST00000340913" /note="color: #ff9900; direction: RIGHT" prim_transcript 534..1749 /label=HNRNPA1-279 /note="primary transcript ENST00000679101" /note="color: #a6acb3; direction: RIGHT" prim_transcript 556..6896 /label=HNRNPA1-205 /note="primary transcript ENST00000547566 Nonsense mediated decay" /note="color: #a6acb3; direction: RIGHT" prim_transcript 556..3686 /label=HNRNPA1-206 /note="primary transcript ENST00000547708" /note="color: #a6acb3; direction: RIGHT" prim_transcript 557..5553 /label=HNRNPA1-280 /note="primary transcript ENST00000679228 Retained intron" /note="color: #a6acb3; direction: RIGHT" prim_transcript 564..2414 /label=HNRNPA1-207 /note="primary transcript ENST00000547870 Retained intron" /note="color: #a6acb3; direction: RIGHT" prim_transcript 571..2294 /label=HNRNPA1-213 /note="primary transcript ENST00000551702" /note="color: #a6acb3; direction: RIGHT" prim_transcript 583..6540 /label=HNRNPA1-257 /note="primary transcript ENST00000678365" /note="color: #a6acb3; direction: RIGHT" prim_transcript 583..4689 /label=HNRNPA1-201 /note="primary transcript ENST00000330752" /note="color: #a6acb3; direction: RIGHT" prim_transcript 583..4125 /label=HNRNPA1-221 /note="primary transcript ENST00000676794" /note="color: #a6acb3; direction: RIGHT" prim_transcript 588..5059 /label=HNRNPA1-204 /note="primary transcript ENST00000547276" /note="color: #a6acb3; direction: RIGHT" prim_transcript 588..2108 /label=HNRNPA1-272 /note="primary transcript ENST00000678919" /note="color: #a6acb3; direction: RIGHT" prim_transcript 588..1749 /label=HNRNPA1-268 /note="primary transcript ENST00000678690" /note="color: #a6acb3; direction: RIGHT" prim_transcript 616..6895 /label=HNRNPA1-232 /note="primary transcript ENST00000677220 Nonsense mediated decay" /note="color: #a6acb3; direction: RIGHT" CDS join(616..630,1194..1310,1603..1749,1898..2108,2202..2294, 2381..2473,2608..2682,3620..3775,4066..4121) /codon_start=1 /label=HNRNPA1-203 /note="coding sequence ENSP00000448617" /note="This feature has 9 segments: 1: 616 .. 630 / #993366 / ENSE00002347985 2: 1194 .. 1310 / #993366 / ENSE00003542256 3: 1603 .. 1749 / #993366 / ENSE00003638233 4: 1898 .. 2108 / #993366 / ENSE00003578192 5: 2202 .. 2294 / #993366 / ENSE00003790955 6: 2381 .. 2473 / #993366 / ENSE00000920032 7: 2608 .. 2682 / #993366 / ENSE00000920033 8: 3620 .. 3775 / #993366 / ENSE00001532273 9: 4066 .. 4121 / #993366 / ENSE00003335203" /translation="MSKSESPKEPEQLRKLFIGGLSFETTDESLRSHFEQWGTLTDCVV MRDPNTKRSRGFGFVTYATVEEVDAAMNARPHKVDGRVVEPKRAVSREDSQRPGAHLTV KKIFVGGIKEDTEEHHLRDYFEQYGKIEVIEIMTDRGSGKKRGFAFVTFDDHDSVDKIV IQKYHTVNGHNCEVRKALSKQEMASASSSQRGRSGSGNFGGGRGGGFGGNDNFGRGGNF SGRGGFGGSRGGGGYGGSGDGYNGFGNDGSNFGGGGSYNDFGNYNNQSSNFGPMKGGNF GGRSSGPYGGGGQYFAKPRNQGGYGGSSSSSSYGSGRRF" CDS join(616..630,1194..1310,1603..1749,1898..2108,2202..2294, 2381..2473,2608..2682,3620..3775,4048..4121) /codon_start=1 /label=HNRNPA1-237 /note="coding sequence ENSP00000503651" /note="This feature has 9 segments: 1: 616 .. 630 / #993366 / ENSE00003904821 2: 1194 .. 1310 / #993366 / ENSE00003542256 3: 1603 .. 1749 / #993366 / ENSE00003638233 4: 1898 .. 2108 / #993366 / ENSE00003578192 5: 2202 .. 2294 / #993366 / ENSE00003790955 6: 2381 .. 2473 / #993366 / ENSE00000920032 7: 2608 .. 2682 / #993366 / ENSE00000920033 8: 3620 .. 3775 / #993366 / ENSE00001532273 9: 4048 .. 4121 / #993366 / ENSE00003909411" /translation="MSKSESPKEPEQLRKLFIGGLSFETTDESLRSHFEQWGTLTDCVV MRDPNTKRSRGFGFVTYATVEEVDAAMNARPHKVDGRVVEPKRAVSREDSQRPGAHLTV KKIFVGGIKEDTEEHHLRDYFEQYGKIEVIEIMTDRGSGKKRGFAFVTFDDHDSVDKIV IQKYHTVNGHNCEVRKALSKQEMASASSSQRGRSGSGNFGGGRGGGFGGNDNFGRGGNF SGRGGFGGSRGGGGYGGSGDGYNGFGNDGSNFGGGGSYNDFGNYNNQSSNFGPMKGGNF GGRSSGPYGGGGQYFAKPRNQEKLYFSGGYGGSSSSSSYGSGRRF" CDS join(616..630,1194..1310,1603..1749,1898..2108,2202..2294, 2381..2473,2608..2682,2887..3042,3620..3775,4066..4121) /codon_start=1 /label=HNRNPA1-231 /note="coding sequence ENSP00000503610" /note="This feature has 10 segments: 1: 616 .. 630 / #993366 / ENSE00003904821 2: 1194 .. 1310 / #993366 / ENSE00003542256 3: 1603 .. 1749 / #993366 / ENSE00003638233 4: 1898 .. 2108 / #993366 / ENSE00003578192 5: 2202 .. 2294 / #993366 / ENSE00003790955 6: 2381 .. 2473 / #993366 / ENSE00000920032 7: 2608 .. 2682 / #993366 / ENSE00000920033 8: 2887 .. 3042 / #993366 / ENSE00001690592 9: 3620 .. 3775 / #993366 / ENSE00001532273 10: 4066 .. 4121 / #993366 / ENSE00002373379" /translation="MSKSESPKEPEQLRKLFIGGLSFETTDESLRSHFEQWGTLTDCVV MRDPNTKRSRGFGFVTYATVEEVDAAMNARPHKVDGRVVEPKRAVSREDSQRPGAHLTV KKIFVGGIKEDTEEHHLRDYFEQYGKIEVIEIMTDRGSGKKRGFAFVTFDDHDSVDKIV IQKYHTVNGHNCEVRKALSKQEMASASSSQRGRSGSGNFGGGRGGGFGGNDNFGRGGNF SGRGGFGGSRGGGGYGGSGDGYNGFGNDGGYGGGGPGYSGGSRGYGSGGQGYGNQGSGY GGSGSYDSYNNGGGGGFGGGSGSNFGGGGSYNDFGNYNNQSSNFGPMKGGNFGGRSSGP YGGGGQYFAKPRNQGGYGGSSSSSSYGSGRRF" CDS join(616..630,1194..1310,1603..1749,1898..2108,2202..2294, 2381..2470,2608..2682,3620..3775,4066..4121) /codon_start=1 /label=HNRNPA1-234 /note="coding sequence ENSP00000503649" /note="This feature has 9 segments: 1: 616 .. 630 / #993366 / ENSE00003908493 2: 1194 .. 1310 / #993366 / ENSE00003542256 3: 1603 .. 1749 / #993366 / ENSE00003638233 4: 1898 .. 2108 / #993366 / ENSE00003578192 5: 2202 .. 2294 / #993366 / ENSE00003790955 6: 2381 .. 2470 / #993366 / ENSE00003906223 7: 2608 .. 2682 / #993366 / ENSE00000920033 8: 3620 .. 3775 / #993366 / ENSE00001532273 9: 4066 .. 4121 / #993366 / ENSE00003335203" /translation="MSKSESPKEPEQLRKLFIGGLSFETTDESLRSHFEQWGTLTDCVV MRDPNTKRSRGFGFVTYATVEEVDAAMNARPHKVDGRVVEPKRAVSREDSQRPGAHLTV KKIFVGGIKEDTEEHHLRDYFEQYGKIEVIEIMTDRGSGKKRGFAFVTFDDHDSVDKIV IQKYHTVNGHNCEVRKALSKQEMASASSSQRGRSGSGNFGGGRGGGFGGNDNFGRGGNF SGRGFGGSRGGGGYGGSGDGYNGFGNDGSNFGGGGSYNDFGNYNNQSSNFGPMKGGNFG GRSSGPYGGGGQYFAKPRNQGGYGGSSSSSSYGSGRRF" CDS join(616..630,1194..1310,1603..1749,1898..2108,2202..2294, 2381..2473,2608..2682,3620..3775,4066..4121) /codon_start=1 /label=HNRNPA1-209 /note="coding sequence ENSP00000446486" /note="This feature has 9 segments: 1: 616 .. 630 / #993366 / ENSE00003904453 2: 1194 .. 1310 / #993366 / ENSE00003542256 3: 1603 .. 1749 / #993366 / ENSE00003638233 4: 1898 .. 2108 / #993366 / ENSE00003578192 5: 2202 .. 2294 / #993366 / ENSE00003790955 6: 2381 .. 2473 / #993366 / ENSE00000920032 7: 2608 .. 2682 / #993366 / ENSE00000920033 8: 3620 .. 3775 / #993366 / ENSE00001532273 9: 4066 .. 4121 / #993366 / ENSE00002373379" /translation="MSKSESPKEPEQLRKLFIGGLSFETTDESLRSHFEQWGTLTDCVV MRDPNTKRSRGFGFVTYATVEEVDAAMNARPHKVDGRVVEPKRAVSREDSQRPGAHLTV KKIFVGGIKEDTEEHHLRDYFEQYGKIEVIEIMTDRGSGKKRGFAFVTFDDHDSVDKIV IQKYHTVNGHNCEVRKALSKQEMASASSSQRGRSGSGNFGGGRGGGFGGNDNFGRGGNF SGRGGFGGSRGGGGYGGSGDGYNGFGNDGSNFGGGGSYNDFGNYNNQSSNFGPMKGGNF GGRSSGPYGGGGQYFAKPRNQGGYGGSSSSSSYGSGRRF" CDS join(616..630,1194..1310,1603..1749,1898..2108,2202..2294, 2381..2473,2608..2682,2887..3042,3620..3775,4066..4121) /codon_start=1 /label=HNRNPA1-202 /note="coding sequence ENSP00000341826" /note="This feature has 10 segments: 1: 616 .. 630 / #993366 / ENSE00002375624 2: 1194 .. 1310 / #993366 / ENSE00003542256 3: 1603 .. 1749 / #993366 / ENSE00003638233 4: 1898 .. 2108 / #993366 / ENSE00003578192 5: 2202 .. 2294 / #993366 / ENSE00003790955 6: 2381 .. 2473 / #993366 / ENSE00000920032 7: 2608 .. 2682 / #993366 / ENSE00000920033 8: 2887 .. 3042 / #993366 / ENSE00001690592 9: 3620 .. 3775 / #993366 / ENSE00001532273 10: 4066 .. 4121 / #993366 / ENSE00003335203" /translation="MSKSESPKEPEQLRKLFIGGLSFETTDESLRSHFEQWGTLTDCVV MRDPNTKRSRGFGFVTYATVEEVDAAMNARPHKVDGRVVEPKRAVSREDSQRPGAHLTV KKIFVGGIKEDTEEHHLRDYFEQYGKIEVIEIMTDRGSGKKRGFAFVTFDDHDSVDKIV IQKYHTVNGHNCEVRKALSKQEMASASSSQRGRSGSGNFGGGRGGGFGGNDNFGRGGNF SGRGGFGGSRGGGGYGGSGDGYNGFGNDGGYGGGGPGYSGGSRGYGSGGQGYGNQGSGY GGSGSYDSYNNGGGGGFGGGSGSNFGGGGSYNDFGNYNNQSSNFGPMKGGNFGGRSSGP YGGGGQYFAKPRNQGGYGGSSSSSSYGSGRRF" CDS join(616..630,1194..1310,1603..1749,1898..2108,2202..2294, 2381..2477,2651..2682,3620..3775,4066..4121) /codon_start=1 /label=HNRNPA1-201 /note="coding sequence ENSP00000333504" /note="This feature has 9 segments: 1: 616 .. 630 / #993366 / ENSE00003482266 2: 1194 .. 1310 / #993366 / ENSE00003542256 3: 1603 .. 1749 / #993366 / ENSE00003638233 4: 1898 .. 2108 / #993366 / ENSE00003578192 5: 2202 .. 2294 / #993366 / ENSE00003790955 6: 2381 .. 2477 / #993366 / ENSE00003686633 7: 2651 .. 2682 / #993366 / ENSE00002368928 8: 3620 .. 3775 / #993366 / ENSE00001532273 9: 4066 .. 4121 / #993366 / ENSE00003335203" /translation="MSKSESPKEPEQLRKLFIGGLSFETTDESLRSHFEQWGTLTDCVV MRDPNTKRSRGFGFVTYATVEEVDAAMNARPHKVDGRVVEPKRAVSREDSQRPGAHLTV KKIFVGGIKEDTEEHHLRDYFEQYGKIEVIEIMTDRGSGKKRGFAFVTFDDHDSVDKIV IQKYHTVNGHNCEVRKALSKQEMASASSSQRGRSGSGNFGGGRGGGFGGNDNFGRGGNF SGRGIGDGYNGFGNDGSNFGGGGSYNDFGNYNNQSSNFGPMKGGNFGGRSSGPYGGGGQ YFAKPRNQGGYGGSSSSSSYGSGRRF" CDS join(616..630,1194..1310,1603..1749,1898..2108,2202..2294, 2381..2404,3635..3775,4066..4121) /codon_start=1 /label=HNRNPA1-204 /note="coding sequence ENSP00000447260" /note="This feature has 8 segments: 1: 616 .. 630 / #993366 / ENSE00002340307 2: 1194 .. 1310 / #993366 / ENSE00003542256 3: 1603 .. 1749 / #993366 / ENSE00003638233 4: 1898 .. 2108 / #993366 / ENSE00003578192 5: 2202 .. 2294 / #993366 / ENSE00003790955 6: 2381 .. 2404 / #993366 / ENSE00002408284 7: 3635 .. 3775 / #993366 / ENSE00003230437 8: 4066 .. 4121 / #993366 / ENSE00003335203" /translation="MSKSESPKEPEQLRKLFIGGLSFETTDESLRSHFEQWGTLTDCVV MRDPNTKRSRGFGFVTYATVEEVDAAMNARPHKVDGRVVEPKRAVSREDSQRPGAHLTV KKIFVGGIKEDTEEHHLRDYFEQYGKIEVIEIMTDRGSGKKRGFAFVTFDDHDSVDKIV IQKYHTVNGHNCEVRKALSKQEMASASSSQRGRSGSGNFGGGSYNDFGNYNNQSSNFGP MKGGNFGGRSSGPYGGGGQYFAKPRNQGGYGGSSSSSSYGSGRRF" CDS join(616..630,1194..1310,1603..1749,1898..1946,2608..2682, 3620..3686) /codon_start=1 /label=HNRNPA1-206 /note="coding sequence ENSP00000448229" /note="This feature has 6 segments: 1: 616 .. 630 / #993366 / ENSE00002404163 2: 1194 .. 1310 / #993366 / ENSE00003542256 3: 1603 .. 1749 / #993366 / ENSE00003638233 4: 1898 .. 1946 / #993366 / ENSE00002217779 5: 2608 .. 2682 / #993366 / ENSE00000920033 6: 3620 .. 3686 / #993366 / ENSE00002343511" /translation="MSKSESPKEPEQLRKLFIGGLSFETTDESLRSHFEQWGTLTDCVV MRDPNTKRSRGFGFVTYATVEEVDAAMNARPHKVDGRVVEPKRAVSREDSQRPGAHLTV KKIFVGGFGGSRGGGGYGGSGDGYNGFGNDGSNFGGGGSYNDFGNYNNQSSN" CDS join(616..630,1194..1310,1603..1749,1898..2108,2202..2294, 2381..2526) /codon_start=1 /label=HNRNPA1-238 /note="coding sequence ENSP00000502985" /note="This feature has 6 segments: 1: 616 .. 630 / #993366 / ENSE00003904821 2: 1194 .. 1310 / #993366 / ENSE00003542256 3: 1603 .. 1749 / #993366 / ENSE00003638233 4: 1898 .. 2108 / #993366 / ENSE00003578192 5: 2202 .. 2294 / #993366 / ENSE00003790955 6: 2381 .. 2526 / #993366 / ENSE00003909262" /translation="MSKSESPKEPEQLRKLFIGGLSFETTDESLRSHFEQWGTLTDCVV MRDPNTKRSRGFGFVTYATVEEVDAAMNARPHKVDGRVVEPKRAVSREDSQRPGAHLTV KKIFVGGIKEDTEEHHLRDYFEQYGKIEVIEIMTDRGSGKKRGFAFVTFDDHDSVDKIV IQKYHTVNGHNCEVRKALSKQEMASASSSQRGRSGSGNFGGGRGGGFGGNDNFGRGGNF SGRGMYGLSTCSSDFSPSLL" CDS join(616..630,1194..1310,1898..2108,2202..2294) /codon_start=1 /label=HNRNPA1-213 /note="coding sequence ENSP00000448117" /note="This feature has 4 segments: 1: 616 .. 630 / #993366 / ENSE00002415467 2: 1194 .. 1310 / #993366 / ENSE00003542256 3: 1898 .. 2108 / #993366 / ENSE00003578192 4: 2202 .. 2294 / #993366 / ENSE00003790955" /translation="MSKSESPKEPEQLRKLFIGGLSFETTDESLRSHFEQWGTLTDCVD SQRPGAHLTVKKIFVGGIKEDTEEHHLRDYFEQYGKIEVIEIMTDRGSGKKRGFAFVTF DDHDSVDKIVIQKYHTVNGHNCEVRKALSKQEMASASSSQR" CDS join(616..630,1898..2108) /codon_start=1 /label=HNRNPA1-272 /note="coding sequence ENSP00000504604" /note="This feature has 2 segments: 1: 616 .. 630 / #993366 / ENSE00002340307 2: 1898 .. 2108 / #993366 / ENSE00003578192" /translation="MSKSEDSQRPGAHLTVKKIFVGGIKEDTEEHHLRDYFEQYGKIEV IEIMTDRGSGKKRGFAFVTFDDHDSVDKIV" CDS join(616..630,1603..1749) /codon_start=1 /label=HNRNPA1-268 /note="coding sequence ENSP00000503229" /note="This feature has 2 segments: 1: 616 .. 630 / #993366 / ENSE00002340307 2: 1603 .. 1749 / #993366 / ENSE00003638233" /translation="MSKSEVMRDPNTKRSRGFGFVTYATVEEVDAAMNARPHKVDGRVV EPKRAVSRE" prim_transcript 680..5047 /label=HNRNPA1-250 /note="primary transcript ENST00000678077" /note="color: #a6acb3; direction: RIGHT" prim_transcript 814..2434 /label=HNRNPA1-208 /note="primary transcript ENST00000548688" /note="color: #a6acb3; direction: RIGHT" CDS join(831..902,1194..1310,1603..1749,1898..2108,2202..2294, 2381..2434) /codon_start=1 /label=HNRNPA1-208 /note="coding sequence ENSP00000447782" /note="This feature has 6 segments: 1: 831 .. 902 / #993366 / ENSE00002340109 2: 1194 .. 1310 / #993366 / ENSE00003542256 3: 1603 .. 1749 / #993366 / ENSE00003638233 4: 1898 .. 2108 / #993366 / ENSE00003578192 5: 2202 .. 2294 / #993366 / ENSE00003790955 6: 2381 .. 2434 / #993366 / ENSE00002411353" /translation="MRDSLLVAKFLGTQDLCLFLNLALSPKEPEQLRKLFIGGLSFETT DESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTYATVEEVDAAMNARPHKVDGRVVE PKRAVSREDSQRPGAHLTVKKIFVGGIKEDTEEHHLRDYFEQYGKIEVIEIMTDRGSGK KRGFAFVTFDDHDSVDKIVIQKYHTVNGHNCEVRKALSKQEMASASSSQRGRSGSGNFG GGRGGGFGG" prim_transcript 1603..4125 /label=HNRNPA1-282 /note="primary transcript ENST00000679273 Nonsense mediated decay" /note="color: #a6acb3; direction: RIGHT" prim_transcript 1603..4125 /label=HNRNPA1-261 /note="primary transcript ENST00000678448 Nonsense mediated decay" /note="color: #a6acb3; direction: RIGHT" prim_transcript 1603..2294 /label=HNRNPA1-222 /note="primary transcript ENST00000676842 Nonsense mediated decay" /note="color: #a6acb3; direction: RIGHT" prim_transcript 1603..2294 /label=HNRNPA1-210 /note="primary transcript ENST00000550994 Nonsense mediated decay" /note="color: #a6acb3; direction: RIGHT" CDS join(1606..1749,1898..2108,2202..2294,2381..2473,2608..2682, 3620..3775,4066..4121) /codon_start=1 /label=HNRNPA1-250 /note="coding sequence ENSP00000504814" /note="This feature has 7 segments: 1: 1606 .. 1749 / #993366 / ENSE00003909462 2: 1898 .. 2108 / #993366 / ENSE00003578192 3: 2202 .. 2294 / #993366 / ENSE00003790955 4: 2381 .. 2473 / #993366 / ENSE00000920032 5: 2608 .. 2682 / #993366 / ENSE00000920033 6: 3620 .. 3775 / #993366 / ENSE00001532273 7: 4066 .. 4121 / #993366 / ENSE00003335203" /translation="MRDPNTKRSRGFGFVTYATVEEVDAAMNARPHKVDGRVVEPKRAV SREDSQRPGAHLTVKKIFVGGIKEDTEEHHLRDYFEQYGKIEVIEIMTDRGSGKKRGFA FVTFDDHDSVDKIVIQKYHTVNGHNCEVRKALSKQEMASASSSQRGRSGSGNFGGGRGG GFGGNDNFGRGGNFSGRGGFGGSRGGGGYGGSGDGYNGFGNDGSNFGGGGSYNDFGNYN NQSSNFGPMKGGNFGGRSSGPYGGGGQYFAKPRNQGGYGGSSSSSSYGSGRRF" CDS 1606..1749 /codon_start=1 /label=HNRNPA1-279 /note="coding sequence ENSP00000503166" /note="color: #993366" /translation="MRDPNTKRSRGFGFVTYATVEEVDAAMNARPHKVDGRVVEPKRAV SRE" prim_transcript 2202..3775 /label=HNRNPA1-242 /note="primary transcript ENST00000677636" /note="color: #a6acb3; direction: RIGHT" CDS join(2202..2294,3620..3775) /codon_start=1 /label=HNRNPA1-242 /note="coding sequence ENSP00000503254" /note="This feature has 2 segments: 1: 2202 .. 2294 / #993366 / ENSE00003790955 2: 3620 .. 3775 / #993366 / ENSE00001532273" /translation="FRNTIL*MATTVKLEKPCQSKRWLVLHPAKEEAILEVVEATMILG ITTISLQILDP*REEILEAEALAPMAVEANTLQNHETK" prim_transcript 2202..3042 /label=HNRNPA1-243 /note="primary transcript ENST00000677645" /note="color: #a6acb3; direction: RIGHT" CDS join(2202..2294,2887..3042) /codon_start=1 /label=HNRNPA1-243 /note="coding sequence ENSP00000504753" /note="This feature has 2 segments: 1: 2202 .. 2294 / #993366 / ENSE00003790955 2: 2887 .. 3042 / #993366 / ENSE00001690592" /translation="FRNTIL*MATTVKLEKPCQSKRWLVLHPAKEVVMEEAALVTLEEA EAMEVVDRVMETRAVAMAGVAAMTAITTEAEAALAVVV" prim_transcript 2202..2682 /label=HNRNPA1-236 /note="primary transcript ENST00000677291" /note="color: #a6acb3; direction: RIGHT" CDS join(2202..2294,2608..2682) /codon_start=1 /label=HNRNPA1-236 /note="coding sequence ENSP00000504458" /note="This feature has 2 segments: 1: 2202 .. 2294 / #993366 / ENSE00003790955 2: 2608 .. 2682 / #993366 / ENSE00000920033" /translation="FRNTIL*MATTVKLEKPCQSKRWLVLHPAKEVALVAAVVVVDMVA VGMAIMDLVMM" prim_transcript 2381..3775 /label=HNRNPA1-270 /note="primary transcript ENST00000678876" /note="color: #a6acb3; direction: RIGHT" CDS join(2381..2473,3620..3775) /codon_start=1 /label=HNRNPA1-270 /note="coding sequence ENSP00000503756" /note="This feature has 2 segments: 1: 2381 .. 2473 / #993366 / ENSE00000920032 2: 3620 .. 3775 / #993366 / ENSE00001532273" /translation="VEVVLETLVVVVEVVSVGMTTSVVEETSVVVEAILEVVEATMILG ITTISLQILDP*REEILEAEALAPMAVEANTLQNHETK" prim_transcript 2381..3775 /label=HNRNPA1-249 /note="primary transcript ENST00000677945" /note="color: #a6acb3; direction: RIGHT" CDS join(2381..2473,3635..3775) /codon_start=1 /label=HNRNPA1-249 /note="coding sequence ENSP00000503056" /note="This feature has 2 segments: 1: 2381 .. 2473 / #993366 / ENSE00000920032 2: 3635 .. 3775 / #993366 / ENSE00003230437" /translation="VEVVLETLVVVVEVVSVGMTTSVVEETSVVVVVEATMILGITTIS LQILDP*REEILEAEALAPMAVEANTLQNHETK" prim_transcript 2381..3775 /label=HNRNPA1-273 /note="primary transcript ENST00000678934" /note="color: #a6acb3; direction: RIGHT" CDS join(2381..2449,3635..3775) /codon_start=1 /label=HNRNPA1-273 /note="coding sequence ENSP00000504850" /note="This feature has 2 segments: 1: 2381 .. 2449 / #993366 / ENSE00003908467 2: 3635 .. 3775 / #993366 / ENSE00003230437" /translation="VEVVLETLVVVVEVVSVGMTTSVVVEATMILGITTISLQILDP*R EEILEAEALAPMAVEANTLQNHETK" prim_transcript 2381..3775 /label=HNRNPA1-265 /note="primary transcript ENST00000678597" /note="color: #a6acb3; direction: RIGHT" CDS join(2381..2419,3635..3775) /codon_start=1 /label=HNRNPA1-265 /note="coding sequence ENSP00000504089" /note="This feature has 2 segments: 1: 2381 .. 2419 / #993366 / ENSE00003904315 2: 3635 .. 3775 / #993366 / ENSE00003230437" /translation="VEVVLETLVVVVEVVEATMILGITTISLQILDP*REEILEAEALA PMAVEANTLQNHETK" prim_transcript 2381..3775 /label=HNRNPA1-269 /note="primary transcript ENST00000678873" /note="color: #a6acb3; direction: RIGHT" CDS join(2381..2470,3635..3775) /codon_start=1 /label=HNRNPA1-269 /note="coding sequence ENSP00000503516" /note="This feature has 2 segments: 1: 2381 .. 2470 / #993366 / ENSE00003906223 2: 3635 .. 3775 / #993366 / ENSE00003230437" /translation="VEVVLETLVVVVEVVSVGMTTSVVEETSVVVVEATMILGITTISL QILDP*REEILEAEALAPMAVEANTLQNHETK" prim_transcript 2381..3042 /label=HNRNPA1-256 /note="primary transcript ENST00000678347" /note="color: #a6acb3; direction: RIGHT" CDS join(2381..2473,2887..3042) /codon_start=1 /label=HNRNPA1-256 /note="coding sequence ENSP00000504511" /note="This feature has 2 segments: 1: 2381 .. 2473 / #993366 / ENSE00000920032 2: 2887 .. 3042 / #993366 / ENSE00001690592" /translation="VEVVLETLVVVVEVVSVGMTTSVVEETSVVVVVMEEAALVTLEEA EAMEVVDRVMETRAVAMAGVAAMTAITTEAEAALAVVV" prim_transcript 2608..6895 /label=HNRNPA1-245 /note="primary transcript ENST00000677778" /note="color: #a6acb3; direction: RIGHT" CDS join(2608..2682,6470..6540,6761..6859) /codon_start=1 /label=HNRNPA1-245 /note="coding sequence ENSP00000504642" /note="This feature has 3 segments: 1: 2608 .. 2682 / #993366 / ENSE00000920033 2: 6470 .. 6540 / #993366 / ENSE00003906917 3: 6761 .. 6859 / #993366 / ENSE00003908956" /translation="VALVAAVVVVDMVAVGMAIMDLVMMGGVCY*SYQLLKTETHLSKF VAERNVLVKTFI*ATVLRYHCHAVYMSCSAAQIPFC" prim_transcript 2608..4125 /label=HNRNPA1-230 /note="primary transcript ENST00000677191 Nonsense mediated decay" /note="color: #a6acb3; direction: RIGHT" prim_transcript 2608..4125 /label=HNRNPA1-262 /note="primary transcript ENST00000678456" /note="color: #a6acb3; direction: RIGHT" prim_transcript 2608..4125 /label=HNRNPA1-217 /note="primary transcript ENST00000676572 Nonsense mediated decay" /note="color: #a6acb3; direction: RIGHT" prim_transcript 2608..4125 /label=HNRNPA1-284 /note="primary transcript ENST00000679344 Nonsense mediated decay" /note="color: #a6acb3; direction: RIGHT" prim_transcript 2608..4125 /label=HNRNPA1-254 /note="primary transcript ENST00000678212 Nonsense mediated decay" /note="color: #a6acb3; direction: RIGHT" CDS join(2608..2682,4066..4121) /codon_start=1 /label=HNRNPA1-262 /note="coding sequence ENSP00000504368" /note="This feature has 2 segments: 1: 2608 .. 2682 / #993366 / ENSE00000920033 2: 4066 .. 4121 / #993366 / ENSE00003335203" /translation="VALVAAVVVVDMVAVGMAIMDLVMMVAMAVPAAAVAMAVAEDF" prim_transcript 2608..3775 /label=HNRNPA1-233 /note="primary transcript ENST00000677224" /note="color: #a6acb3; direction: RIGHT" CDS join(2608..2631,3635..3775) /codon_start=1 /label=HNRNPA1-233 /note="coding sequence ENSP00000502876" /note="This feature has 2 segments: 1: 2608 .. 2631 / #993366 / ENSE00003908189 2: 3635 .. 3775 / #993366 / ENSE00003230437" /translation="VALVAAVVVVEATMILGITTISLQILDP*REEILEAEALAPMAVE ANTLQNHETK" prim_transcript 2608..3775 /label=HNRNPA1-235 /note="primary transcript ENST00000677279" /note="color: #a6acb3; direction: RIGHT" CDS join(2608..2628,3635..3775) /codon_start=1 /label=HNRNPA1-235 /note="coding sequence ENSP00000503602" /note="This feature has 2 segments: 1: 2608 .. 2628 / #993366 / ENSE00003906754 2: 3635 .. 3775 / #993366 / ENSE00003230437" /translation="VALVAAVVVEATMILGITTISLQILDP*REEILEAEALAPMAVEA NTLQNHETK" prim_transcript 2608..3775 /label=HNRNPA1-263 /note="primary transcript ENST00000678513" /note="color: #a6acb3; direction: RIGHT" CDS join(2608..2649,3635..3775) /codon_start=1 /label=HNRNPA1-263 /note="coding sequence ENSP00000503162" /note="This feature has 2 segments: 1: 2608 .. 2649 / #993366 / ENSE00003910145 2: 3635 .. 3775 / #993366 / ENSE00003230437" /translation="VALVAAVVVVDMVAVVEATMILGITTISLQILDP*REEILEAEAL APMAVEANTLQNHETK" prim_transcript 2608..3775 /label=HNRNPA1-219 /note="primary transcript ENST00000676707" /note="color: #a6acb3; direction: RIGHT" CDS join(2608..2686,3645..3775) /codon_start=1 /label=HNRNPA1-219 /note="coding sequence ENSP00000504696" /note="This feature has 2 segments: 1: 2608 .. 2686 / #993366 / ENSE00003904248 2: 3645 .. 3775 / #993366 / ENSE00003907277" /translation="VALVAAVVVVDMVAVGMAIMDLVMMVTTMILGITTISLQILDP*R EEILEAEALAPMAVEANTLQNHETK" prim_transcript 2608..3775 /label=HNRNPA1-277 /note="primary transcript ENST00000679063" /note="color: #a6acb3; direction: RIGHT" CDS join(2608..2686,3624..3775) /codon_start=1 /label=HNRNPA1-277 /note="coding sequence ENSP00000504683" /note="This feature has 2 segments: 1: 2608 .. 2686 / #993366 / ENSE00003904248 2: 3624 .. 3775 / #993366 / ENSE00003904986" /translation="VALVAAVVVVDMVAVGMAIMDLVMMVTILEVVEATMILGITTISL QILDP*REEILEAEALAPMAVEANTLQNHETK" prim_transcript 2608..3775 /label=HNRNPA1-255 /note="primary transcript ENST00000678279" /note="color: #a6acb3; direction: RIGHT" prim_transcript 2608..3775 /label=HNRNPA1-241 /note="primary transcript ENST00000677539 Nonsense mediated decay" /note="color: #a6acb3; direction: RIGHT" prim_transcript 2608..3503 /label=HNRNPA1-283 /note="primary transcript ENST00000679319" /note="color: #a6acb3; direction: RIGHT" prim_transcript 2887..4477 /label=HNRNPA1-278 /note="primary transcript ENST00000679079" /note="color: #a6acb3; direction: RIGHT" CDS join(2887..3042,4357..4370) /codon_start=1 /label=HNRNPA1-278 /note="coding sequence ENSP00000504545" /note="This feature has 2 segments: 1: 2887 .. 3042 / #993366 / ENSE00001690592 2: 4357 .. 4370 / #993366 / ENSE00003905132" /translation="VVMEEAALVTLEEAEAMEVVDRVMETRAVAMAGVAAMTAITTEAE AALAVVVETKL" prim_transcript 2887..4125 /label=HNRNPA1-275 /note="primary transcript ENST00000678970" /note="color: #a6acb3; direction: RIGHT" prim_transcript 2887..4125 /label=HNRNPA1-225 /note="primary transcript ENST00000676886" /note="color: #a6acb3; direction: RIGHT" prim_transcript 2887..4125 /label=HNRNPA1-258 /note="primary transcript ENST00000678412" /note="color: #a6acb3; direction: RIGHT" CDS join(2887..2970,4066..4121) /codon_start=1 /label=HNRNPA1-225 /note="coding sequence ENSP00000503468" /note="This feature has 2 segments: 1: 2887 .. 2970 / #993366 / ENSE00003905700 2: 4066 .. 4121 / #993366 / ENSE00003335203" /translation="VVMEEAALVTLEEAEAMEVVDRVMETRAVAMAVPAAAVAMAVAED F" CDS join(2887..3042,4066..4121) /codon_start=1 /label=HNRNPA1-258 /note="coding sequence ENSP00000503562" /note="This feature has 2 segments: 1: 2887 .. 3042 / #993366 / ENSE00001690592 2: 4066 .. 4121 / #993366 / ENSE00003335203" /translation="VVMEEAALVTLEEAEAMEVVDRVMETRAVAMAGVAAMTAITTEAE AALAVVVVAMAVPAAAVAMAVAEDF" CDS join(2887..3042,3700..3775,4066..4096) /codon_start=1 /label=HNRNPA1-275 /note="coding sequence ENSP00000503825" /note="This feature has 3 segments: 1: 2887 .. 3042 / #993366 / ENSE00001690592 2: 3700 .. 3775 / #993366 / ENSE00003906662 3: 4066 .. 4096 / #993366 / ENSE00003905334" /translation="VVMEEAALVTLEEAEAMEVVDRVMETRAVAMAGVAAMTAITTEAE AALAVVVGGNFGGRSSGPYGGGGQYFAKPRNQGGYGGSSSSS" prim_transcript 2887..3775 /label=HNRNPA1-215 /note="primary transcript ENST00000676472" /note="color: #a6acb3; direction: RIGHT" CDS join(2887..2940,3635..3775) /codon_start=1 /label=HNRNPA1-215 /note="coding sequence ENSP00000503977" /note="This feature has 2 segments: 1: 2887 .. 2940 / #993366 / ENSE00003906591 2: 3635 .. 3775 / #993366 / ENSE00003230437" /translation="VVMEEAALVTLEEAEAMEVVEATMILGITTISLQILDP*REEILE AEALAPMAVEANTLQNHETK" prim_transcript 2887..3775 /label=HNRNPA1-266 /note="primary transcript ENST00000678611" /note="color: #a6acb3; direction: RIGHT" CDS join(2887..3042,3635..3775) /codon_start=1 /label=HNRNPA1-266 /note="coding sequence ENSP00000504004" /note="This feature has 2 segments: 1: 2887 .. 3042 / #993366 / ENSE00001690592 2: 3635 .. 3775 / #993366 / ENSE00003230437" /translation="VVMEEAALVTLEEAEAMEVVDRVMETRAVAMAGVAAMTAITTEAE AALAVVVVVEATMILGITTISLQILDP*REEILEAEALAPMAVEANTLQNHETK" prim_transcript 2887..3775 /label=HNRNPA1-227 /note="primary transcript ENST00000676951" /note="color: #a6acb3; direction: RIGHT" CDS join(2887..3046,3624..3775) /codon_start=1 /label=HNRNPA1-227 /note="coding sequence ENSP00000502981" /note="This feature has 2 segments: 1: 2887 .. 3046 / #993366 / ENSE00003909797 2: 3624 .. 3775 / #993366 / ENSE00003904986" /translation="VVMEEAALVTLEEAEAMEVVDRVMETRAVAMAGVAAMTAITTEAE AALAVVVVAILEVVEATMILGITTISLQILDP*REEILEAEALAPMAVEANTLQNHETK " prim_transcript 2887..3775 /label=HNRNPA1-223 /note="primary transcript ENST00000676853" /note="color: #a6acb3; direction: RIGHT" CDS join(2887..3046,3645..3775) /codon_start=1 /label=HNRNPA1-223 /note="coding sequence ENSP00000503749" /note="This feature has 2 segments: 1: 2887 .. 3046 / #993366 / ENSE00003909797 2: 3645 .. 3775 / #993366 / ENSE00003907277" /translation="VVMEEAALVTLEEAEAMEVVDRVMETRAVAMAGVAAMTAITTEAE AALAVVVVATMILGITTISLQILDP*REEILEAEALAPMAVEANTLQNHETK" prim_transcript 2887..3775 /label=HNRNPA1-260 /note="primary transcript ENST00000678424" /note="color: #a6acb3; direction: RIGHT" CDS join(2887..3033,3635..3775) /codon_start=1 /label=HNRNPA1-260 /note="coding sequence ENSP00000503030" /note="This feature has 2 segments: 1: 2887 .. 3033 / #993366 / ENSE00003905209 2: 3635 .. 3775 / #993366 / ENSE00003230437" /translation="VVMEEAALVTLEEAEAMEVVDRVMETRAVAMAGVAAMTAITTEAE AALAVVEATMILGITTISLQILDP*REEILEAEALAPMAVEANTLQNHETK" prim_transcript 2887..3775 /label=HNRNPA1-264 /note="primary transcript ENST00000678581" /note="color: #a6acb3; direction: RIGHT" CDS join(2887..3036,3635..3775) /codon_start=1 /label=HNRNPA1-264 /note="coding sequence ENSP00000504251" /note="This feature has 2 segments: 1: 2887 .. 3036 / #993366 / ENSE00003905233 2: 3635 .. 3775 / #993366 / ENSE00003230437" /translation="VVMEEAALVTLEEAEAMEVVDRVMETRAVAMAGVAAMTAITTEAE AALAVVVEATMILGITTISLQILDP*REEILEAEALAPMAVEANTLQNHETK" prim_transcript 2887..3042 /label=HNRNPA1-239 /note="primary transcript ENST00000677488" /note="color: #a6acb3; direction: RIGHT" CDS join(2887..2901,3022..3042) /codon_start=1 /label=HNRNPA1-239 /note="coding sequence ENSP00000504431" /note="This feature has 2 segments: 1: 2887 .. 2901 / #993366 / ENSE00003905140 2: 3022 .. 3042 / #993366 / ENSE00003908630" /translation="VVMEEAALAVVV" prim_transcript 2887..3042 /label=HNRNPA1-274 /note="primary transcript ENST00000678947" /note="color: #a6acb3; direction: RIGHT" CDS join(2887..2901,3016..3042) /codon_start=1 /label=HNRNPA1-274 /note="coding sequence ENSP00000503733" /note="This feature has 2 segments: 1: 2887 .. 2901 / #993366 / ENSE00003905140 2: 3016 .. 3042 / #993366 / ENSE00003909966" /translation="VVMEEAEAALAVVV" primer_bind 3285..3309 /label=PCR Forward /note="color: black; sequence: CTTTGGGACCTTAGGCGCTTAGTTG; added: 2022-06-15" prim_transcript 3531..4179 /label=HNRNPA1-212 /note="primary transcript ENST00000551679 Retained intron" /note="color: #a6acb3; direction: RIGHT" gene 3561..64891 /note="gene ENSG00000258344 lncRNA" /note="color: #a6acb3; direction: RIGHT" prim_transcript 3561..64891 /note="primary transcript ENST00000553061 lncRNA" /note="color: #a6acb3; direction: RIGHT" prim_transcript 3620..6895 /label=HNRNPA1-247 /note="primary transcript ENST00000677840" /note="color: #a6acb3; direction: RIGHT" CDS join(3620..3775,6470..6540,6761..6859) /codon_start=1 /label=HNRNPA1-247 /note="coding sequence ENSP00000503273" /note="This feature has 3 segments: 1: 3620 .. 3775 / #993366 / ENSE00001532273 2: 6470 .. 6540 / #993366 / ENSE00003906917 3: 6761 .. 6859 / #993366 / ENSE00003908956" /translation="EAILEVVEATMILGITTISLQILDP*REEILEAEALAPMAVEANT LQNHETKGGVCY*SYQLLKTETHLSKFVAERNVLVKTFI*ATVLRYHCHAVYMSCSAAQ IPFC" prim_transcript 3620..4477 /label=HNRNPA1-276 /note="primary transcript ENST00000679026" /note="color: #a6acb3; direction: RIGHT" CDS join(3620..3775,4357..4370) /codon_start=1 /label=HNRNPA1-276 /note="coding sequence ENSP00000504539" /note="This feature has 2 segments: 1: 3620 .. 3775 / #993366 / ENSE00001532273 2: 4357 .. 4370 / #993366 / ENSE00003905132" /translation="EAILEVVEATMILGITTISLQILDP*REEILEAEALAPMAVEANT LQNHETKETKL" prim_transcript 3620..3775 /label=HNRNPA1-240 /note="primary transcript ENST00000677518" /note="color: #a6acb3; direction: RIGHT" CDS join(3620..3715,3746..3775) /codon_start=1 /label=HNRNPA1-240 /note="coding sequence ENSP00000503537" /note="This feature has 2 segments: 1: 3620 .. 3715 / #993366 / ENSE00003906374 2: 3746 .. 3775 / #993366 / ENSE00003905025" /translation="EAILEVVEATMILGITTISLQILDP*REEILEANTLQNHETK" prim_transcript 3620..3775 /label=HNRNPA1-248 /note="primary transcript ENST00000677847" /note="color: #a6acb3; direction: RIGHT" CDS join(3620..3643,3704..3775) /codon_start=1 /label=HNRNPA1-248 /note="coding sequence ENSP00000503848" /note="This feature has 2 segments: 1: 3620 .. 3643 / #993366 / ENSE00003909837 2: 3704 .. 3775 / #993366 / ENSE00003905720" /translation="EAILEVVEEILEAEALAPMAVEANTLQNHETK" misc_feature 3620..3719 /label=Donor Template SNV -> REV /note="color: #00ffff" primer_bind complement(3620..3719) /label=Donor Template SNV -> REV /note="color: blue; sequence: CTGCCTCCAAAATTTCCTCCCTTCATGGGTCCAAAATTTGAAGACTGATTGTTGTAATT CCCAAAATCATTGTAGCTTCCACCACCTCCAAAATTGCTTC; added: 2022-06-15" misc_feature 3638..3657 /label=Protospacer Sequence /note="color: #ff0000" primer_bind 3638..3657 /label=gRNA Protospacer /note="color: black; sequence: GTGGAAGCTACAATAATTTT; added: 2022-06-15" misc_feature 3652 /label=SNV /note="REV=G SNV=A" /note="color: #ff9900" misc_feature 3658..3660 /label=PAM /note="color: #ffff00" CDS join(3694..3775,4066..4121) /codon_start=1 /label=HNRNPA1-221 /note="coding sequence ENSP00000504819" /note="This feature has 2 segments: 1: 3694 .. 3775 / #993366 / ENSE00003904662 2: 4066 .. 4121 / #993366 / ENSE00003335203" /translation="MKGGNFGGRSSGPYGGGGQYFAKPRNQGGYGGSSSSSSYGSGRRF " primer_bind complement(3758..3777) /label=Sanger Sequencing Primer /note="color: black; sequence: ACCTTGGTTTCGTGGTTTTG; added: 2022-06-15" prim_transcript 4066..6896 /label=HNRNPA1-244 /note="primary transcript ENST00000677666" /note="color: #a6acb3; direction: RIGHT" prim_transcript 4066..6896 /label=HNRNPA1-228 /note="primary transcript ENST00000677061 Nonsense mediated decay" /note="color: #a6acb3; direction: RIGHT" prim_transcript 4066..6896 /label=HNRNPA1-229 /note="primary transcript ENST00000677072 Nonsense mediated decay" /note="color: #a6acb3; direction: RIGHT" prim_transcript 4066..6896 /label=HNRNPA1-218 /note="primary transcript ENST00000676661 Nonsense mediated decay" /note="color: #a6acb3; direction: RIGHT" prim_transcript 4066..6540 /label=HNRNPA1-281 /note="primary transcript ENST00000679251 Nonsense mediated decay" /note="color: #a6acb3; direction: RIGHT" prim_transcript 4066..6540 /label=HNRNPA1-253 /note="primary transcript ENST00000678199 Nonsense mediated decay" /note="color: #a6acb3; direction: RIGHT" prim_transcript 4066..6540 /label=HNRNPA1-226 /note="primary transcript ENST00000676925 Nonsense mediated decay" /note="color: #a6acb3; direction: RIGHT" prim_transcript 4066..6540 /label=HNRNPA1-246 /note="primary transcript ENST00000677832 Nonsense mediated decay" /note="color: #a6acb3; direction: RIGHT" prim_transcript 4066..4773 /label=HNRNPA1-251 /note="primary transcript ENST00000678093" /note="color: #a6acb3; direction: RIGHT" CDS 4066..4121 /codon_start=1 /label=HNRNPA1-244 /note="coding sequence ENSP00000504664" /note="color: #993366" /translation="VAMAVPAAAVAMAVAEDF" primer_bind complement(4186..4210) /label=PCR Reverse /note="color: black; sequence: GTTGCACTGCTCAGCTACATTAGGG; added: 2022-06-15" prim_transcript 4517..6540 /label=HNRNPA1-267 /note="primary transcript ENST00000678687" /note="color: #a6acb3; direction: RIGHT" prim_transcript 5616..6540 /label=HNRNPA1-216 /note="primary transcript ENST00000676528" /note="color: #a6acb3; direction: RIGHT" prim_transcript 5715..6859 /label=HNRNPA1-211 /note="primary transcript ENST00000551665 Retained intron" /note="color: #a6acb3; direction: RIGHT" prim_transcript 5755..6895 /label=HNRNPA1-214 /note="primary transcript ENST00000551803" /note="color: #a6acb3; direction: RIGHT" prim_transcript 6055..6895 /label=HNRNPA1-252 /note="primary transcript ENST00000678103" /note="color: #a6acb3; direction: RIGHT" prim_transcript 6055..6540 /label=HNRNPA1-224 /note="primary transcript ENST00000676855" /note="color: #a6acb3; direction: RIGHT" prim_transcript 6645..6895 /label=HNRNPA1-271 /note="primary transcript ENST00000678900" /note="color: #a6acb3; direction: RIGHT" ORIGIN 1 aaagctagga caaactcccg ccaacacgca ggcgccgtag gttcactgcc tactcctgcc 61 cgccatttca cgtgttctca gaggcaggtg gaacttctta atgcgcctgc gcaaaactcg 121 ccattttact acacgtgcgg tcaacaagag ttcattgcaa aaaaattgtt acctcctggc 181 tgcttgtcta atacatagtg ttaatcatgc tttgccaagc gacttgactg taatatttgc 241 gcgtggaaga ttaaaaagat gttaaacacc caaggtagat tcaaatgtga atgattggtc 301 ggttggccaa tcagactggt taacaataac attactcggg aaccaatgga ctccaagggg 361 tggagacggc gtagaacgac cgaaggaatg acgttacaca gcaatgtggc accacaggcc 421 aatagcaggg ggaagcgatt tcaagtatcc aatcagagct gttccagggc ggagtctacc 481 aatgccgaaa gcgaggaggc ggggtaaaaa agagagggcg aaggtaggct ggcagatacg 541 ttcgtcagct tgctcctttc tgcccgtgga cgccgccgaa gaagcatcgt taaagtctct 601 cttcaccctg ccgtcatgtc taagtcagag gtgagttagg cgcgctttcc cacttgaatt 661 ttttcctctc cctttcctga atcggtaaga tgctgctggg tttcgttcct tgcaccagcc 721 cattctacag ttccttcggt cgctgccacg gcctacccct cccaaagttc aagtcgccat 781 tttgtcctct tgatcgccat gaggccgctc tccgccaacc atgagttatc atgcgggact 841 cgttactcgt agcaaaattc ttaggcacac aggatctttg tcttttttta aaccttgcct 901 tggtgagcga gttttctaaa gagcgattag tcccattgtg gagatgcacc cctaccgccc 961 aagcctttgt tgcgcgtgcg tcggaaggcg actagggacg catgcgcttg cgatttccta 1021 gcactcccaa ctccagcata cggcctccct tgataggcag aagcacgtgt cttgttgcga 1081 cctgaacgaa caataagtgc taggtacaca gttggtgtct agtttttctt ttcctcgatg 1141 gaaattgttt cgtgttgtag cccatttaac acttccccct ccccccactc tagtctccta 1201 aagagcccga acagctgagg aagctcttca ttggagggtt gagctttgaa acaactgatg 1261 agagcctgag gagccatttt gagcaatggg gaacgctcac ggactgtgtg gtaagatttg 1321 gaagggacaa agcagtaaaa cagccgattt ccttggctta tcttggtgca gtcttctccg 1381 aatgcttatg aaagtagtta atagcattat agttagagct ttgttggcaa aggaacgtcc 1441 tgctttgatt ttaaaagcta cctcttaaat ctagggtagt gggaaactgg acgacttttt 1501 ataaaaggct ggtgtaaagt ttcctattgc cctattcaaa gttaaaatga caaaagcttt 1561 tgcggtcaga ctttgtgtta cataaattaa cactgttctc aggtaatgag agatccaaac 1621 accaagcgct ccaggggctt tgggtttgtc acatatgcca ctgtggagga ggtggatgca 1681 gctatgaatg caaggccaca caaggtggat ggaagagttg tggaaccaaa gagagctgtc 1741 tccagagaag tgagtgggtt ttttttcttc ttcttcttaa acttacttgg atatgtgctg 1801 ctatggactt aagattcggg agttttctaa acttaccaaa attttttatt cgagtatagg 1861 ctttgctaat ctaaacctat ggtttttctc ctattaggat tctcaaagac caggtgccca 1921 cttaactgtg aaaaagatat ttgttggtgg cattaaagaa gacactgaag aacatcacct 1981 aagagattat tttgaacagt atggaaaaat tgaagtgatt gaaatcatga ctgaccgagg 2041 cagtggcaag aaaaggggct ttgcctttgt aacctttgac gaccatgact ccgtggataa 2101 gattgtcagt aagtatcaga tagtggcatt tagtaagggt tccacaatct gtatggcatt 2161 ctaaaccctg ataccatgtt gtatctatgt ttttttttta gttcagaaat accatactgt 2221 gaatggccac aactgtgaag ttagaaaagc cctgtcaaag caagagatgg ctagtgcttc 2281 atccagccaa agaggtatgc ttgttgctta attaaacctt aaaggtaact ttgagttact 2341 ccagtatgaa tgatttaatg cttaaacttc atgtcttaag gtcgaagtgg ttctggaaac 2401 tttggtggtg gtcgtggagg tggtttcggt gggaatgaca acttcggtcg tggaggaaac 2461 ttcagtggtc gtggtatgta tggtttatct acatgtagtt ctgacttctc accatctttg 2521 ctatgaagat tttacagtac gggaactgca ttcagaatgt cactttaagt ccaagtcata 2581 cttaaaactt gaaacttttt cttacaggtg gctttggtgg cagccgtggt ggtggtggat 2641 atggtggcag tggggatggc tataatggat ttggtaatga tggtaagttt tttaggaata 2701 agtagagaaa aattcctggc aacctggatc tttagaatag gttagtagag actaaaattc 2761 tggtgcatgt caaactcaac tttgcccata acacgcatgc tgtgagcagg ccttcagccg 2821 ttacacttgc acaagttttc attgtcaaat acttttgtct tattgagaag aattgtattc 2881 ttgtaggtgg ttatggagga ggcggccctg gttactctgg aggaagcaga ggctatggaa 2941 gtggtggaca gggttatgga aaccagggca gtggctatgg cgggagtggc agctatgaca 3001 gctataacaa cggaggcgga ggcggctttg gcggtggtag tggtaggtat ccagtgatcc 3061 aagtacttgg tgtgacagct agattagcct tttagagctt gggttctggt gctgttgaag 3121 cattgtgtgg tacactgcat ggtatattaa aaacaaatgg gcttgctatg ctacctcctc 3181 ctagctttaa gctggggccg cctcactccc aaatagtaga gataagtgga tagtgttgtc 3241 tttgagttag attagtatca tagaaggatt tagtatttta actcctttgg gaccttaggc 3301 gcttagttga tgtatccaag atacttctgc ttgctgtggc cctggatccg tgaaggcctt 3361 caaggctgaa gggtatgctt gtgccactct gaaaatctct ttattttatg tcatggtgag 3421 ttaggccagt tttctttgta ttactggatt attcaactga atgcctttcc cagagaatga 3481 aatgcaaaga ttggagtcac catagtttgg gagaaaggaa ggctgataac tcaaccttat 3541 tttattctga ctgctaaaca gaattggaaa ctaacatcat cctcaggtaa cagataaagg 3601 ccctctttcc cattcatagg aagcaatttt ggaggtggtg gaagctacaa tgattttggg 3661 aattacaaca atcagtcttc aaattttgga cccatgaagg gaggaaattt tggaggcaga 3721 agctctggcc cctatggcgg tggaggccaa tactttgcaa aaccacgaaa ccaaggtatg 3781 gtatctatgt aattttggat aatgtcaaaa gagtgtctgt agctactgct gggaagaaag 3841 ccctttaact gctatgtctg ggcagcaaaa cgtttatagt ttagaacctt cagaaagtga 3901 taatttgatc acaaattaga aaaatcatgg gacctcttta ccacctccct tgtagtaggg 3961 ccatttttaa atggccagac acttgaattt aacttttatt atcccaaata tgaaaacatt 4021 actgttggca ctttgaaact ttaaaagaaa aattgtactt ttcaggtggc tatggcggtt 4081 ccagcagcag cagtagctat ggcagtggca gaagatttta attaggtaag taagcacctt 4141 tttgtgtgtt gacataattt tttaaattgc tgatgaaccc aataacccta atgtagctga 4201 gcagtgcaac atagttaaca ttataattgc agtaattgtg gatataaagt taatattcag 4261 atcagcaaaa tttgtgggaa acaaacttga tattggattg tagccttgag tcttaatatg 4321 tttagattaa caactttatt ccatattgtt caacaggaaa caaagcttag caggagagga 4381 gagccagaga agtgacaggg aagctacagg ttacaacaga tttgtgaact cagccaagca 4441 cagtggtggc agggcctagc tgctacaaag aagacatgtt ttagacaaat actcatgtgt 4501 atgggcaaaa aactcgagga ctgtatttgt gactaattgt ataacaggtt attttagttt 4561 ctgttctgtg gaaagtgtaa agcattccaa caaagggttt taatgtagat tttttttttt 4621 gcaccccatg ctgttgattg ctaaatgtaa cagtctgatc gtgacgctga ataaatgtct 4681 tttttttaat gtgctgtgta aagttagtct actcttaagc catcttggta aatttcccca 4741 acagtgtgaa gttagaattc cttcagggtg atgccaggtt ctatttggaa tttatataca 4801 acctgcttgg gtggagaagc cattgtcttc ggaaaccttg gtgtagttga actgatagtt 4861 actgttgtga cctgaagttc accattaaaa gggattaccc aagcaaaatc atggaatggt 4921 tataaaagtg attgttggca catcctatgc aatatatcta aattgaataa tggtaccaga 4981 taaaattata gatgggaatg aagcttgtgt atccattatc atgtgtaatc aataaacgat 5041 ttaattctct tgaatgaaat gacaactgta tggatttggg actggcagag atttggactt 5101 tccctaccca ctccccctga taataatgtt gaatgcttct atcacaattc aagttcaaag 5161 ctctgccagg gaatagaaac tagctgctgg ctaatgccgc tccataaatc cgcagatttg 5221 aagtgtctgg gaggcctttt aaaaataact aatatcagaa agcattttaa tgaacgtaaa 5281 gataggctta cattaaagga aaactgcagt ttgactgggt tctggttggg tgggccttca 5341 gaggttctat cagttaacta tactaattaa tttggagatt caaaccatac caatagaaac 5401 taaatttttc tacataattt catgttaact gcagtttccc tttatggcac aaggggtcac 5461 acaacctacc taaaatgtta attgtataga aaatgatttc taaaccttta acagttaata 5521 tccaataatg tgttatttgt acatagattc ttttgagcct tacctttggt gctctctcaa 5581 tttcagtgct attgtaccta gtagcataga gatttgtcta tcaataggac tgtatattcc 5641 atcccatggg tgtgttggaa gtttggggag gaggagggtg gtgggaggtg ggtgggaggt 5701 ggtggtgggt gggaaagcat gggtgatagt tccatgatac tggctgagtt tgcaatagca 5761 ggtggaaccc taactattga gggagtttgc agatacctca ggattcgtga caatgccttt 5821 aaagatccag gagagatgtt cagctactag gaactgctag caagtatagc gcgaatggct 5881 ccgagctcag acactctaca gctgagagta gacacttgtg gtatgtggag tacagataag 5941 ccaggggcag gccacggcac gctccatgaa agctaggagg gagtgaaata tcagtgatca 6001 tcgcaaggaa ggaggcagac aagagtaagg cacacctgac tcttaggact agcagtcaga 6061 accaggagga aaggttttat tgctatgcgg gtaggtaaga acagatttta cttacatcca 6121 tatagttact taaagtccag ttttctgtta aacatttttc ttaatatatt gagccaaaac 6181 tagtccagtt aagctgaact tggtttttct ggagatgaat tgttttaaat tgacacccta 6241 ttgatggctc ccagttgaag gaagtgagca cattatttgt actgtgaata taaatttttg 6301 cccttttatt tatcttcctt tgacccattt ccttaaaata atggctcaaa gtaatagact 6361 tccccaaatg gtggggggat gggtgggtta ttaatgggag gtatgggggg tttagcttga 6421 gatgggactt ggtcttagag ctagttctaa aggttgttta cttttctagg gaggagtctg 6481 ctactagtct tatcagctct taaaaacaga aactcatctg tccaagttcg tggcagaaag 6541 gtaagttttt acaaattagt gctcagcaaa agaatgccct gcgttcccaa agtaaaagaa 6601 tgacaagctg taccttaaac caaaacactt cgtaatctca tccaattgca aaaagagtta 6661 ttagccaacc aggtattccc agtagtgaca gtggatataa ctgtgtagtc attcacctct 6721 gcttatatga atactttaca acctcttttg ccttttgcag gaacgtcctt gtgaagacct 6781 ttatctgagc cactgtactt cgttatcact gccatgcagt ttacatgagc tgttctgcag 6841 ctcaaattcc attttgtgaa tgggtttttt tttttaataa actgtattta acttag //